Transcript: lnc-PPM1M-2:8

Basic information

LNCipedia transcript ID: lnc-PPM1M-2:8 
LNCipedia gene ID: lnc-PPM1M-2
RefSeq ID: NR_135307
Location (hg38): chr3:52239238-52241097
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1121 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135307.1
Alternative gene names: LOC101929054


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -102.7823 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPM1M-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SPCS1-19:2
5.1 lnc-SPCS1-19:2
5.2 lnc-PPM1M-2:8