Transcript: lnc-PPIAL4G-4:17

Basic information

LNCipedia transcript ID: lnc-PPIAL4G-4:17 
LNCipedia gene ID: lnc-PPIAL4G-4
Location (hg38): chr1:148385081-148385701
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 621 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc009wlf_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.5353 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPIAL4G-4:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIAL4A-4:2
4.0 lnc-PPIAL4A-4:2
4.1 lnc-PPIAL4A-4:2
5.0 lnc-PPIAL4A-4:2
5.1 lnc-PPIAL4G-4:15
5.2 lnc-PPIAL4G-4:17