Transcript: lnc-PPDPFL-2:5

Basic information

LNCipedia transcript ID: lnc-PPDPFL-2:5 
LNCipedia gene ID: lnc-PPDPFL-2
Location (hg38): chr8:49168519-49225029
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 469 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253474.1|ENST00000519828.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.6169 non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPDPFL-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C8orf22-2:8
5.0 lnc-C8orf22-2:8
5.1 lnc-SDCBP-103:5
5.2 lnc-PPDPFL-2:5