Transcript: lnc-PPDPFL-17:1

Basic information

LNCipedia transcript ID: lnc-PPDPFL-17:1 
LNCipedia gene ID: lnc-PPDPFL-17
Location (hg38): chr8:50490795-50491465
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 671 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT126528
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 46.6014 non-coding 
CPAT coding probability 10.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPDPFL-17:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC090186.1-10:1
4.0 lnc-AC090186.1-10:1
4.1 lnc-AC090186.1-10:1
5.0 lnc-AC090186.1-10:1
5.1 lnc-SDCBP-96:1
5.2 lnc-PPDPFL-17:1