Transcript: lnc-PPARGC1A-4:4

Basic information

LNCipedia transcript ID: lnc-PPARGC1A-4:4 
LNCipedia gene ID: lnc-PPARGC1A-4
Location (hg38): chr4:23866120-23890029
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 433 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT095789
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 491.3123 coding 
CPAT coding probability 49.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPARGC1A-4:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX15-4:3
4.0 lnc-PPARGC1A-4:4
4.1 lnc-PPARGC1A-4:4
5.0 lnc-PPARGC1A-4:4
5.1 lnc-AFAP1-116:3
5.2 lnc-PPARGC1A-4:4