Transcript: lnc-POTEH-7:4

Basic information

LNCipedia transcript ID: lnc-POTEH-7:4 
LNCipedia gene ID: lnc-POTEH-7
Ensembl Gene ID: ENSG00000206195
Ensembl Transcript ID: ENST00000447898
Location (hg38): chr22:15784992-15829984
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4136 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT083084; ENST00000447898.1; ENST00000447898.5
Alternative gene names: ENSG00000206195.6; AP000525.9; ENSG00000206195.10; DUXAP8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.9409 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEH-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP000525.1-3:4
4.0 lnc-AP000525.1-3:4
4.1 lnc-AP000525.1-3:4
5.0 lnc-AP000525.1-3:4
5.1 lnc-SERPIND1-100:4
5.2 lnc-POTEH-7:4