Transcript: lnc-POTEH-7:2

Basic information

LNCipedia transcript ID: lnc-POTEH-7:2 
LNCipedia gene ID: lnc-POTEH-7
Ensembl Gene ID: ENSG00000206195
Ensembl Transcript ID: ENST00000437781
Location (hg38): chr22:15784963-15827708
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2398 bp
Exons: 8
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT083085; ENST00000437781.1; ENST00000437781.5
Alternative gene names: ENSG00000206195.6; AP000525.9; ENSG00000206195.10; DUXAP8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.9415 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 1 coding 
covF1Prop0.169811321
seqAAMWLQMAGFPKGFWLKHIPWCICTAVSSSLQLCLNRSFTMLSSRFNSMAPNDEISF
orfFrame7.23866294

In stringent set: no

Locus conservation

Locus conservation?
lnc-POTEH-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP000525.1-3:2
4.0 lnc-AP000525.1-3:2
4.1 lnc-AP000525.1-3:2
5.0 lnc-AP000525.1-3:2
5.1 lnc-SERPIND1-100:2
5.2 lnc-POTEH-7:2