Transcript: lnc-POTEG-7:3

Basic information

LNCipedia transcript ID: lnc-POTEG-7:3 
LNCipedia gene ID: lnc-POTEG-7
Location (hg38): chr14:19083134-19093337
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 725 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022361; NONHSAT035487; NR_073459; NR_073460
Alternative gene names: XLOC_010962; linc-BRF1-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.4269 non-coding 
CPAT coding probability 2.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEG-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POTEM-5:2
3.1 lnc-POTEM-7:2
4.0 lnc-POTEM-7:2
4.1 lnc-POTEM-7:2
5.0 lnc-POTEM-7:2
5.1 lnc-TEP1-25:2
5.2 lnc-POTEG-7:3