Transcript: lnc-POTEB3-16:1

Basic information

LNCipedia transcript ID: lnc-POTEB3-16:1 
LNCipedia gene ID: lnc-POTEB3-16
Ensembl Gene ID: ENSG00000280881
Ensembl Transcript ID: ENST00000626448
Location (hg38): chr15:21328380-21343881
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 752 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626448.1
Alternative gene names: ENSG00000280881.1; RP11-275E15.2; AC060814.6; AC060814.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.8647 non-coding 
CPAT coding probability 5.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEB3-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-POTEB-16:1
4.1 lnc-POTEB-16:1
5.0 lnc-POTEB-16:1
5.1 lnc-ATP10A-43:1
5.2 lnc-POTEB3-16:1