Transcript: lnc-POMP-11:1

Basic information

LNCipedia transcript ID: lnc-POMP-11:1 
LNCipedia gene ID: lnc-POMP-11
Location (hg38): chr13:29051730-29067107
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1799 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_800_chr13:29625866-29632713_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.9687 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POMP-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POMP-11:1
4.0 lnc-POMP-11:1
4.1 lnc-POMP-11:1
5.0 lnc-POMP-11:1
5.1 lnc-GTF3A-37:1
5.2 lnc-POMP-11:1