Transcript: lnc-POLR1A-8:2

Basic information

LNCipedia transcript ID: lnc-POLR1A-8:2 
LNCipedia gene ID: lnc-POLR1A-8
Location (hg38): chr2:85903323-85904803
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 576 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005191; NONHSAT072075
Alternative gene names: XLOC_002192; linc-ST3GAL5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.8444 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLR1A-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ST3GAL5-1:2
3.1 lnc-ST3GAL5-1:2
4.0 lnc-ST3GAL5-1:2
4.1 lnc-ST3GAL5-1:2
5.0 lnc-ST3GAL5-1:2
5.1 lnc-ZNF514-145:2
5.2 lnc-POLR1A-8:2