Transcript: lnc-POLN-1:3

Basic information

LNCipedia transcript ID: lnc-POLN-1:3 
LNCipedia gene ID: lnc-POLN-1
Location (hg38): chr4:2017565-2023673
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 447 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009008; NONHSAT094759
Alternative gene names: XLOC_003854; linc-WHSC2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.1611 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLN-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POLN-1:3
3.1 lnc-POLN-1:3
4.0 lnc-POLN-1:3
4.1 lnc-POLN-1:3
5.0 lnc-POLN-1:3
5.1 lnc-PSAPL1-68:3
5.2 lnc-POLN-1:3