Transcript: lnc-POLE4-15:8

Basic information

LNCipedia transcript ID: lnc-POLE4-15:8 
LNCipedia gene ID: lnc-POLE4-15
Ensembl Gene ID: ENSG00000270571
Ensembl Transcript ID: ENST00000604271
Location (hg38): chr2:75154366-75189949
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3438 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000604271.2
Alternative gene names: ENSG00000270571.2; RP11-355F16.1; AC007681.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.5532 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POLE4-15:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POLE4-4:1
4.0 lnc-POLE4-4:1
4.1 lnc-POLE4-15:8
5.0 lnc-POLE4-15:8
5.1 lnc-POLE4-15:8
5.2 lnc-POLE4-15:8