Transcript: lnc-POF1B-3:1

Basic information

LNCipedia transcript ID: lnc-POF1B-3:1 
LNCipedia gene ID: lnc-POF1B-3
Location (hg38): chrX:85212091-85243779
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 326 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000114008.1|FTMT28900020189.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -124.2646 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POF1B-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-POF1B-3:1
5.0 lnc-POF1B-3:1
5.1 lnc-PHKA1-54:5
5.2 lnc-POF1B-3:1