Transcript: lnc-PNRC1-4:1

Basic information

LNCipedia transcript ID: lnc-PNRC1-4:1 
LNCipedia gene ID: lnc-PNRC1-4
Location (hg38): chr6:88713261-88718458
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 904 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT113932
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.5298 non-coding 
CPAT coding probability 19.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PNRC1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL079342.1-3:1
4.0 lnc-AL079342.1-3:1
4.1 lnc-AL079342.1-3:1
5.0 lnc-AL079342.1-3:1
5.1 lnc-PM20D2-7:1
5.2 lnc-PNRC1-4:1