Transcript: lnc-PNPLA3-1:5

Basic information

LNCipedia transcript ID: lnc-PNPLA3-1:5 
LNCipedia gene ID: lnc-PNPLA3-1
Location (hg38): chr22:43812422-43813955
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1534 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261251.1|ENST00000564696.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -82.299 non-coding 
CPAT coding probability 11.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PNPLA3-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PNPLA3-1:5
5.0 lnc-PNPLA3-1:5
5.1 lnc-FBLN1-36:1
5.2 lnc-PNPLA3-1:5

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