Transcript: lnc-PMFBP1-8:1

Basic information

LNCipedia transcript ID: lnc-PMFBP1-8:1 
LNCipedia gene ID: lnc-PMFBP1-8
Location (hg38): chr16:73126637-73144447
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1308 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000358463.2
Alternative gene names: ENSG00000197445.2; C16orf47


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -52.7951 non-coding 
CPAT coding probability 20.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PMFBP1-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C16orf47-6:1
4.1 lnc-C16orf47-6:1
5.0 lnc-C16orf47-6:1
5.1 lnc-PHLPP2-23:1
5.2 lnc-PMFBP1-8:1