Transcript: lnc-PLEKHM1-11:1

Basic information

LNCipedia transcript ID: lnc-PLEKHM1-11:1 
LNCipedia gene ID: lnc-PLEKHM1-11
Location (hg38): chr17:45548123-45549136
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1014 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1651:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -199.6661 non-coding 
CPAT coding probability 93.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PLEKHM1-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC091132.2-11:1
4.1 lnc-AC091132.2-11:1
5.0 lnc-AC091132.2-11:1
5.1 lnc-GFAP-36:1
5.2 lnc-PLEKHM1-11:1