Transcript: lnc-PLEKHA8-1:1

Basic information

LNCipedia transcript ID: lnc-PLEKHA8-1:1 
LNCipedia gene ID: lnc-PLEKHA8-1
Ensembl Gene ID: ENSG00000230751
Ensembl Transcript ID: ENST00000415934
Location (hg38): chr7:30140870-30141417
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 437 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000415934.1; AC007036.4-001; OTTHUMT00000327709.1; NONHSAT119851
Alternative gene names: ENSG00000230751.1; AC007036.4; OTTHUMG00000152764.1; AC007036.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.6176 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLEKHA8-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLEKHA8-1:1
4.0 lnc-PLEKHA8-1:1
4.1 lnc-PLEKHA8-1:1
5.0 lnc-PLEKHA8-1:1
5.1 lnc-CCDC129-19:1
5.2 lnc-PLEKHA8-1:1