Transcript: lnc-PLCL2-1:4

Basic information

LNCipedia transcript ID: lnc-PLCL2-1:4 
LNCipedia gene ID: lnc-PLCL2-1
RefSeq ID: NR_135536
Location (hg38): chr3:17742944-17745662
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 470 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135536.1
Alternative gene names: LOC105376975


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -155.3987 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLCL2-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MKRN2-66:2
5.1 lnc-MKRN2-66:2
5.2 lnc-PLCL2-1:4