Transcript: lnc-PLAU-2:1

Basic information

LNCipedia transcript ID: lnc-PLAU-2:1 
LNCipedia gene ID: lnc-PLAU-2
Location (hg38): chr10:74028413-74030204
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 941 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000426210.1; RP11-417O11.6-001; OTTHUMT00000048726.1; NONHSAT014046
Alternative gene names: ENSG00000226458.1; RP11-417O11.6; OTTHUMG00000018493.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.2136 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLAU-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLAU-2:1
4.0 lnc-PLAU-2:1
4.1 lnc-PLAU-2:1
5.0 lnc-PLAU-2:1
5.1 lnc-MTRNR2L5-181:1
5.2 lnc-PLAU-2:1