Transcript: lnc-PLA2G4A-7:8

Basic information

LNCipedia transcript ID: lnc-PLA2G4A-7:8 
LNCipedia gene ID: lnc-PLA2G4A-7
Location (hg38): chr1:189149763-189573358
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2221 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028825.1|ENCT00000015480.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.9255 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLA2G4A-7:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLA2G4A-7:8
5.0 lnc-PLA2G4A-7:8
5.1 lnc-C1orf21-56:6
5.2 lnc-PLA2G4A-7:8