Transcript: lnc-PLA2G4A-7:4

Basic information

LNCipedia transcript ID: lnc-PLA2G4A-7:4 
LNCipedia gene ID: lnc-PLA2G4A-7
Location (hg38): chr1:189149763-189176404
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1438 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028825.1|FTMT20300076001.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -34.0388 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLA2G4A-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PLA2G4A-7:4
5.0 lnc-PLA2G4A-7:4
5.1 lnc-C1orf21-56:2
5.2 lnc-PLA2G4A-7:4