Transcript: lnc-PKN1-1:3

Basic information

LNCipedia transcript ID: lnc-PKN1-1:3 
LNCipedia gene ID: lnc-PKN1-1
Location (hg38): chr19:14489388-14489609
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 222 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT146960
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.4937 non-coding 
CPAT coding probability 14.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PKN1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC012318.1-1:2
4.0 lnc-AC012318.1-1:2
4.1 lnc-AC012318.1-1:2
5.0 lnc-AC012318.1-1:2
5.1 lnc-ZNF763-56:2
5.2 lnc-PKN1-1:3