Transcript: lnc-PKD2L1-1:5

Basic information

LNCipedia transcript ID: lnc-PKD2L1-1:5 
LNCipedia gene ID: lnc-PKD2L1-1
Location (hg38): chr10:100335563-100346529
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 610 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231188.1|ENST00000429420.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -135.4313 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PKD2L1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PKD2L1-1:5
5.0 lnc-PKD2L1-1:5
5.1 lnc-CPN1-8:3
5.2 lnc-PKD2L1-1:5