Transcript: lnc-PKD1L3-4:1

Basic information

LNCipedia transcript ID: lnc-PKD1L3-4:1 
LNCipedia gene ID: lnc-PKD1L3-4
Location (hg38): chr16:71929538-71999978
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5193 bp
Exons: 31
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000335106.1; PKD1L3-201
Alternative gene names: ENSG00000187008.2; PKD1L3; OTTHUMG00000166114.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4179.9576 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PKD1L3-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF821-2:2
4.0 lnc-ZNF821-4:2
4.1 lnc-ZNF821-4:2
5.0 lnc-ZNF821-4:2
5.1 lnc-PHLPP2-9:1
5.2 lnc-PKD1L3-4:1