Transcript: lnc-PIWIL3-2:6

Basic information

LNCipedia transcript ID: lnc-PIWIL3-2:6 
LNCipedia gene ID: lnc-PIWIL3-2
Location (hg38): chr22:24693661-24696033
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1766 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058320.1|ENCT00000281261.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 41.1636 non-coding 
CPAT coding probability 14.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PIWIL3-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PIWIL3-2:6
5.0 lnc-PIWIL3-2:6
5.1 lnc-PITPNB-72:5
5.2 lnc-PIWIL3-2:6