Transcript: lnc-PITPNM3-1:1

Basic information

LNCipedia transcript ID: lnc-PITPNM3-1:1 
LNCipedia gene ID: lnc-PITPNM3-1
Location (hg38): chr17:6443039-6444201
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1163 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032908.1|ENCT00000180376.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.1054 non-coding 
CPAT coding probability 4.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PITPNM3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PITPNM3-1:1
5.0 lnc-PITPNM3-1:1
5.1 lnc-PHF23-21:1
5.2 lnc-PITPNM3-1:1