Transcript: lnc-PIP4K2A-2:2

Basic information

LNCipedia transcript ID: lnc-PIP4K2A-2:2 
LNCipedia gene ID: lnc-PIP4K2A-2
Location (hg38): chr10:23203816-23239816
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 664 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000376501.5
Alternative gene names: ENSG00000204566.6; LINC01552


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.7626 non-coding 
CPAT coding probability 13.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIP4K2A-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C10orf115-2:2
4.1 lnc-C10orf115-2:2
5.0 lnc-C10orf115-2:2
5.1 lnc-MPP7-84:1
5.2 lnc-PIP4K2A-2:2