Transcript: lnc-PINK1-3:2

Basic information

LNCipedia transcript ID: lnc-PINK1-3:2 
LNCipedia gene ID: lnc-PINK1-3
Location (hg38): chr1:20661687-20663579
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1893 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000044100.1|ENCT00000002424.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.8935 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PINK1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PINK1-3:2
5.0 lnc-PINK1-3:2
5.1 lnc-NBPF3-18:2
5.2 lnc-PINK1-3:2