Transcript: lnc-PIGB-3:1

Basic information

LNCipedia transcript ID: lnc-PIGB-3:1 
LNCipedia gene ID: lnc-PIGB-3
Location (hg38): chr15:55106223-55112316
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1011 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_1161_chr15:55398420-55404514_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.8698 non-coding 
CPAT coding probability 2.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIGB-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIGB-3:1
4.0 lnc-PIGB-3:1
4.1 lnc-PIGB-3:1
5.0 lnc-PIGB-3:1
5.1 lnc-MAP2K1-149:1
5.2 lnc-PIGB-3:1