Transcript: lnc-PHF21A-2:1

Basic information

LNCipedia transcript ID: lnc-PHF21A-2:1 
LNCipedia gene ID: lnc-PHF21A-2
Location (hg38): chr11:46170414-46176264
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 664 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_473_chr11:46191964-46197815_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.1534 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PHF21A-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHF21A-2:1
4.0 lnc-PHF21A-2:1
4.1 lnc-PHF21A-2:1
5.0 lnc-PHF21A-2:1
5.1 lnc-RAG2-67:1
5.2 lnc-PHF21A-2:1