Transcript: lnc-PHF14-14:14

Basic information

LNCipedia transcript ID: lnc-PHF14-14:14 
LNCipedia gene ID: lnc-PHF14-14
Ensembl Gene ID: ENSG00000230333
Ensembl Transcript ID: ENST00000616268
Location (hg38): chr7:11376996-11383869
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 242 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616268.4
Alternative gene names: ENSG00000230333.6; AC004538.3; AC004160.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -195.3224 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PHF14-14:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PHF14-14:14
4.1 lnc-PHF14-14:14
5.0 lnc-PHF14-14:14
5.1 lnc-AHR-71:18
5.2 lnc-PHF14-14:14