Transcript: lnc-PGPEP1L-12:4

Basic information

LNCipedia transcript ID: lnc-PGPEP1L-12:4 
LNCipedia gene ID: lnc-PGPEP1L-12
Location (hg38): chr15:97554318-97559091
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 377 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT050740; FPKM1_group_11016_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -560.9788 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PGPEP1L-12:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-82I10.1.1-5:3
4.0 lnc-RP11-82I10.1.1-5:3
4.1 lnc-RP11-82I10.1.1-5:3
5.0 lnc-RP11-82I10.1.1-5:3
5.1 lnc-CIB1-77:4
5.2 lnc-PGPEP1L-12:4