Transcript: lnc-PEX10-3:1

Basic information

LNCipedia transcript ID: lnc-PEX10-3:1 
LNCipedia gene ID: lnc-PEX10-3
Location (hg38): chr1:2374853-2375353
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 501 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000606642.1
Alternative gene names: ENSG00000271921.1; RP4-740C4.9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -65.8508 non-coding 
CPAT coding probability 3.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PEX10-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PEX10-3:1
4.0 lnc-PEX10-3:1
4.1 lnc-PEX10-3:1
5.0 lnc-PEX10-3:1
5.1 lnc-CLSTN1-109:1
5.2 lnc-PEX10-3:1