Transcript: lnc-PDPK1-2:4

Basic information

LNCipedia transcript ID: lnc-PDPK1-2:4 
LNCipedia gene ID: lnc-PDPK1-2
Location (hg38): chr16:2610839-2629111
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 610 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT147805
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 318.3397 coding 
CPAT coding probability 43.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PDPK1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDPK1-2:4
4.0 lnc-PDPK1-2:4
4.1 lnc-PDPK1-2:4
5.0 lnc-PDPK1-2:4
5.1 lnc-DNASE1L2-41:3
5.2 lnc-PDPK1-2:4