Transcript: lnc-PDE7A-4:3

Basic information

LNCipedia transcript ID: lnc-PDE7A-4:3 
LNCipedia gene ID: lnc-PDE7A-4
Location (hg38): chr8:65747705-65842088
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 685 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT126999
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
SRTPAAAAAAAAAARAGR 100% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.6574 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PDE7A-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARMC1-4:2
4.0 lnc-PDE7A-4:3
4.1 lnc-PDE7A-4:3
5.0 lnc-PDE7A-4:3
5.1 lnc-CPA6-32:2
5.2 lnc-PDE7A-4:3