Transcript: lnc-PDCD7-1:1

Basic information

LNCipedia transcript ID: lnc-PDCD7-1:1 
LNCipedia gene ID: lnc-PDCD7-1
Location (hg38): chr15:65093009-65101628
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 7377 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000502113
Alternative gene names: ENSG00000246922


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 450.8536 coding 
CPAT coding probability 4.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PDCD7-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDCD7-1:1
3.1 lnc-PDCD7-1:1
4.0 lnc-PDCD7-1:1
4.1 lnc-PDCD7-1:1
5.0 lnc-PDCD7-1:1
5.1 lnc-TIPIN-39:1
5.2 lnc-PDCD7-1:1