Transcript: lnc-PDCD1-1:16

Basic information

LNCipedia transcript ID: lnc-PDCD1-1:16 
LNCipedia gene ID: lnc-PDCD1-1
RefSeq ID: NR_135768
Location (hg38): chr2:241893983-241899140
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 532 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135768.1
Alternative gene names: LOC285095


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 147.8291 coding 
CPAT coding probability 39.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PDCD1-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PDCD1-1:16
5.1 lnc-PDCD1-1:16
5.2 lnc-PDCD1-1:16