Transcript: lnc-PCYT1A-3:2

Basic information

LNCipedia transcript ID: lnc-PCYT1A-3:2 
LNCipedia gene ID: lnc-PCYT1A-3
Location (hg38): chr3:196197452-196198910
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 572 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT094302
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.6647 non-coding 
CPAT coding probability 4.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCYT1A-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCYT1A-3:2
4.0 lnc-PCYT1A-3:2
4.1 lnc-PCYT1A-3:2
5.0 lnc-PCYT1A-3:2
5.1 lnc-TCTEX1D2-8:2
5.2 lnc-PCYT1A-3:2