Transcript: lnc-PCP4L1-46:2

Basic information

LNCipedia transcript ID: lnc-PCP4L1-46:2 
LNCipedia gene ID: lnc-PCP4L1-46
Location (hg38): chr1:161368022-161371964
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1807 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000437833.2
Alternative gene names: ENSG00000235477.2; RP11-122G18.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.8505 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCP4L1-46:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SDHC-1:2
4.0 lnc-SDHC-1:2
4.1 lnc-SDHC-1:2
5.0 lnc-SDHC-1:2
5.1 lnc-PCP4L1-3:2
5.2 lnc-PCP4L1-46:2