Transcript: lnc-PCNX1-2:6

Basic information

LNCipedia transcript ID: lnc-PCNX1-2:6 
LNCipedia gene ID: lnc-PCNX1-2
Location (hg38): chr14:70809900-70818689
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4601 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259153.1|ENCT00000127419.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.0762 non-coding 
CPAT coding probability 20.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCNX1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PCNX-2:9
5.0 lnc-PCNX-2:9
5.1 lnc-ACOT2-40:6
5.2 lnc-PCNX1-2:6