Transcript: lnc-PCID2-1:3

Basic information

LNCipedia transcript ID: lnc-PCID2-1:3 
LNCipedia gene ID: lnc-PCID2-1
Ensembl Gene ID: ENSG00000283828
Ensembl Transcript ID: ENST00000639766
Location (hg38): chr13:113149432-113154002
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2238 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000639766.1
Alternative gene names: ENSG00000283828.1; AL137002.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 17.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCID2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DCUN1D2-9:1
5.1 lnc-DCUN1D2-9:1
5.2 lnc-PCID2-1:3