Transcript: lnc-PCED1B-5:2

Basic information

LNCipedia transcript ID: lnc-PCED1B-5:2 
LNCipedia gene ID: lnc-PCED1B-5
Location (hg38): chr12:46383673-46652567
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT027865
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.4487 non-coding 
CPAT coding probability 4.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCED1B-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARID2-3:11
4.0 lnc-FAM113B-5:3
4.1 lnc-FAM113B-5:3
5.0 lnc-FAM113B-5:3
5.1 lnc-PCED1B-16:2
5.2 lnc-PCED1B-5:2