Transcript: lnc-PCED1B-12:3

Basic information

LNCipedia transcript ID: lnc-PCED1B-12:3 
LNCipedia gene ID: lnc-PCED1B-12
Location (hg38): chr12:47038678-47039713
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1036 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000008762.1|ENCT00000090477.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.509 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCED1B-12:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM113B-12:1
5.0 lnc-FAM113B-12:1
5.1 lnc-PCED1B-12:1
5.2 lnc-PCED1B-12:3