Transcript: lnc-PCDH20-18:2

Basic information

LNCipedia transcript ID: lnc-PCDH20-18:2 
LNCipedia gene ID: lnc-PCDH20-18
Location (hg38): chr13:62726770-62729853
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 790 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT034152
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.1204 non-coding 
CPAT coding probability 5.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCDH20-18:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH20-18:2
4.0 lnc-PCDH20-18:2
4.1 lnc-PCDH20-18:2
5.0 lnc-PCDH20-18:2
5.1 lnc-CCDC169-238:2
5.2 lnc-PCDH20-18:2