Transcript: lnc-PCDH20-16:1

Basic information

LNCipedia transcript ID: lnc-PCDH20-16:1 
LNCipedia gene ID: lnc-PCDH20-16
Location (hg38): chr13:62520032-62528681
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 201 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_862_chr13:63094164-63102814_kidney
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -257.542 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCDH20-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH20-16:1
4.0 lnc-PCDH20-16:1
4.1 lnc-PCDH20-16:1
5.0 lnc-PCDH20-16:1
5.1 lnc-CCDC169-235:1
5.2 lnc-PCDH20-16:1