Transcript: lnc-PBDC1-3:1

Basic information

LNCipedia transcript ID: lnc-PBDC1-3:1 
LNCipedia gene ID: lnc-PBDC1-3
Location (hg38): chrX:76183290-76188264
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4975 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1874:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.0575 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PBDC1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CXorf26-3:2
4.1 lnc-CXorf26-3:2
5.0 lnc-CXorf26-3:2
5.1 lnc-NHSL2-45:1
5.2 lnc-PBDC1-3:1