Transcript: lnc-PAX9-11:4

Basic information

LNCipedia transcript ID: lnc-PAX9-11:4 
LNCipedia gene ID: lnc-PAX9-11
Ensembl Gene ID: ENSG00000283098
Ensembl Transcript ID: ENST00000634305
Location (hg38): chr14:36320753-36656163
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1737 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634305.1
Alternative gene names: ENSG00000283098.1; AL132857.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAX9-11:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-BRMS1L-27:1
5.1 lnc-BRMS1L-27:1
5.2 lnc-PAX9-11:4