Transcript: lnc-PAX4-1:5

Basic information

LNCipedia transcript ID: lnc-PAX4-1:5 
LNCipedia gene ID: lnc-PAX4-1
Location (hg38): chr7:127649538-127651832
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2295 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000240790.1|MICT00000332655.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.1073 non-coding 
CPAT coding probability 1.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAX4-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PAX4-1:5
5.0 lnc-PAX4-1:5
5.1 lnc-UBE2H-32:4
5.2 lnc-PAX4-1:5